[gmx-users] converting .gro trajectory to .pdb

Chandan Choudhury iitdckc at gmail.com
Wed Jan 18 16:21:50 CET 2017

You can try trjconv.

On Wed, Jan 18, 2017 at 10:14 AM, Irem Altan <irem.altan at duke.edu> wrote:

> Hi,
> I have a trajectory saved in .gro format. It has multiple frames/snapshots
> in it. I’m using .gro format because I needed higher precision than
> standard .pdb precision, but now I can’t visualize it with VMD. I would
> like to convert this to .pdb, and I tried editconf to do this. The problem
> is, it only converts the first frame. How can I convert the entire
> trajectory from .gro to .pdb?
> Best,
> Irem
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Chandan Kumar Choudhury
Post Doctoral Fellow
Clemson University
South Carolina

*"All work and no play makes Jack a dull boy...”*

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