[gmx-users] VMD

Mark Abraham mark.j.abraham at gmail.com
Wed Jan 25 13:07:38 CET 2017


Hi,

Indeed. But unless someone knows what you did with trjconv, and how you
used VMD differently, it will probably stay a mystery.

Mark

On Wed, 25 Jan 2017 11:49 RAHUL SURESH <drrahulsuresh at gmail.com> wrote:

> Thank you mark.
>
> I think this problem prevails for many users. I came across a user forum
> and found same issues.
>
> Anyway Thank you.
>
> On Wed, Jan 25, 2017 at 3:32 PM, Mark Abraham <mark.j.abraham at gmail.com>
> wrote:
>
> > Hi,
> >
> > We can't guess.
> >
> > Mark
> >
> > On Wed, 25 Jan 2017 09:01 RAHUL SURESH <drrahulsuresh at gmail.com> wrote:
> >
> > > I tried that too but there is no visual
> > >
> > > Why is t.?
> > > On Wed, 25 Jan 2017 at 1:07 PM, <jkrieger at mrc-lmb.cam.ac.uk> wrote:
> > >
> > > > Hi Rahul,
> > > >
> > > >
> > > >
> > > > VMD ran out of memory. Try using trjconv to create a new xtc with a
> > > subset
> > > >
> > > > of atoms or a subset of frames.
> > > >
> > > >
> > > >
> > > > Best wishes
> > > >
> > > > James
> > > >
> > > >
> > > >
> > > > > I tried to visualize my xtc on VMD and the job get killed at 7000
> > > frames
> > > >
> > > > >
> > > >
> > > > > why is that so?
> > > >
> > > > >
> > > >
> > > > > --
> > > >
> > > > > *Regards,*
> > > >
> > > > > *Rahul Suresh*
> > > >
> > > > > *Research Scholar*
> > > >
> > > > > *Bharathiar University*
> > > >
> > > > > *Coimbatore*
> > > >
> > > > > --
> > > >
> > > > > Gromacs Users mailing list
> > > >
> > > > >
> > > >
> > > > > * Please search the archive at
> > > >
> > > > > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> > > >
> > > > > posting!
> > > >
> > > > >
> > > >
> > > > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
> > > >
> > > > >
> > > >
> > > > > * For (un)subscribe requests visit
> > > >
> > > > > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users
> > or
> > > > send
> > > >
> > > > > a mail to gmx-users-request at gromacs.org.
> > > >
> > > > >
> > > >
> > > >
> > > >
> > > >
> > > >
> > > > --
> > > >
> > > > Gromacs Users mailing list
> > > >
> > > >
> > > >
> > > > * Please search the archive at
> > > > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> > > > posting!
> > > >
> > > >
> > > >
> > > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
> > > >
> > > >
> > > >
> > > > * For (un)subscribe requests visit
> > > >
> > > > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users
> or
> > > > send a mail to gmx-users-request at gromacs.org.
> > > >
> > > >
> > > --
> > > Gromacs Users mailing list
> > >
> > > * Please search the archive at
> > > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> > > posting!
> > >
> > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
> > >
> > > * For (un)subscribe requests visit
> > > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> > > send a mail to gmx-users-request at gromacs.org.
> > >
> > --
> > Gromacs Users mailing list
> >
> > * Please search the archive at http://www.gromacs.org/
> > Support/Mailing_Lists/GMX-Users_List before posting!
> >
> > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
> >
> > * For (un)subscribe requests visit
> > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> > send a mail to gmx-users-request at gromacs.org.
> >
>
>
>
> --
> *Regards,*
> *Rahul Suresh*
> *Research Scholar*
> *Bharathiar University*
> *Coimbatore*
> --
> Gromacs Users mailing list
>
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send a mail to gmx-users-request at gromacs.org.
>


More information about the gromacs.org_gmx-users mailing list