[gmx-users] Issue with the PDB generated after topology

[Khadija Amine]

Dear Mark,

Thank you for your reply.

My starting pdb sequence on pymol is: A 1-166, B 54-131

After topology generation and solvation, I can display the whole structure
with the two chains A and B but in terms of sequence, the chain B is absent.

Please, let me know if any further information needed.

Khadija


*Khadija Amine*
Ph.D. Biology and Health
Biochemistry & Bioinformatics
Phone: 33339584