[gmx-users] Vmd error

Justin Lemkul jalemkul at vt.edu
Fri Jun 16 13:19:49 CEST 2017



On 6/16/17 12:33 AM, RAHUL SURESH wrote:
> I extended my simulation of a free protein from 100ns to 150ns.
> Corresponding files are extend.gro and extend.xtc.
> I applied pbc conditions and my new xtc s newmd.xtc.
> 
> I tried to visualise my trajectory in vmd
> 
> I uploaded the extend.gro file and  loaded newmd.xtc in gro file. But I
> couldn't visualise the trajectory. No frames are read. Am doing anythg
> wrong?
> 
> Thank you so much for your valuable advice.
> 

Sounds like a problem you should post to the VMD mailing list.  Note any error 
or message from the terminal - VMD usually tells you exactly why it failed.

-Justin

-- 
==================================================

Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 629
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

==================================================


More information about the gromacs.org_gmx-users mailing list