[gmx-users] B-FACTOR

[Kingsley Theras Primus Dass .]

Thanks for the answer !
I tired that too , but the problem is when we tired viewing the pdb
structure in pymol and MOE software , both show different structural
changes ...

Can you please help me how to over come this problem. How to analyse the
output file of  B-FACTOR  in pymol...?

On 9 May 2017 9:31 p.m., "RAHUL SURESH" <drrahulsuresh at gmail.com> wrote:

I am not sure but I think u can calculate t along with rmsf calculation
where you have to generate additional output as pdb file.
On Tue, 9 May 2017 at 6:58 PM, Kingsley Theras Primus Dass . <
105726107 at gms.tcu.edu.tw> wrote:

> Hi everyone !
>  I want to calculate b-factor , but I don't kno how to calculate. Can
> anyone please tell me how to calculate b-factor for a protein and how to
> analyse it ...
>
>
> Thanks in advance
> --
> Gromacs Users mailing list
>
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send a mail to gmx-users-request at gromacs.org.
>
--
*Regards,*
*Rahul Suresh*
*Research Scholar*
*Bharathiar University*
*Coimbatore*
--
Gromacs Users mailing list

* Please search the archive at http://www.gromacs.org/
Support/Mailing_Lists/GMX-Users_List before posting!

* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists

* For (un)subscribe requests visit
https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send
a mail to gmx-users-request at gromacs.org.