[gmx-users] How to use "gmx view" on Ubuntu?

Mark Abraham mark.j.abraham at gmail.com
Tue May 9 22:32:42 CEST 2017


Hi,

Just like all normal installations of GROMACS, you need to run cmake from
your build directory and tell it where the source directory is.  The ".."
works if the source is the parent directory, but if you're not following eg
the installation guide, then you'll have to adapt!

Mark

On Tue, 9 May 2017 22:23 ZHANG Cheng <272699575 at qq.com> wrote:

> Dear Gromacs and Mark Abraham,
> Sorry, I am not familiar with compiling issue.
>
>
> I installed xorg-dev by:
> sudo apt-get install xorg-dev
>
>
> Then, I type
> cmake .. -DGMX_X11=on
>
>
> But I was told:
> CMake Error: The source directory "/home/lanselibai/Cheng/gromacs/... ..."
> does not appear to contain CMakeLists.txt.
>
>
> What I should do next?
>
>
> Thank you.
>
>
> Cheng
>
>
>
>
>
>
> ------------------ Original ------------------
> From:  "ZHANG Cheng";<272699575 at qq.com>;
> Date:  Wed, May 10, 2017 02:58 AM
> To:  "gromacs.org_gmx-users"<gromacs.org_gmx-users at maillist.sys.kth.se>;
>
> Subject:  How to use "gmx view" on Ubuntu?
>
>
>
> Dear Gromacs,
> I am running Gromacs 5.0.4 on Ubuntu 14.04.1 LTS.
>
>
> When I run "gmx view ..." as below:
>
>
> gmx view -f dppc-md.xtc -s dppc-md.tpr
>
>
> I got the following:
>
>
> Compiled without X-Windows - can not run viewer.
>
>
>
>
>
> Can I ask how to use "gmx view" on Ubuntu? Thank you.
>
>
> Yours sincerely
> Cheng
> --
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