[gmx-users] Check stability of complex

[Kashif]

Hi
I have simulated my protein drug complex for 20 ns. My protein size was
actually 600 amino acid residues but I have simulated only docked portion
of my protein which was only about 300 aa residues. Now I want to see the
effect of rest of my protein sequences on the stability of this 300 aa+drug
complex.
How to do that?

thanks


regards
k