[gmx-users] Genion error

[Justin Lemkul]

On 5/28/17 3:43 AM, ‪Mohammad Roostaie‬ ‪ wrote:
> Hi All, when I wanted to add ions to the system, I got this error:
> Fatal error:No line with moleculetype 'SOL' found the [ molecules ] section of file 'gr.top'For more information and tips for troubleshooting, please check the GROMACSwebsite at http://www.gromacs.org/Documentation/Errors
> However, there is 'SOL' molecule type in the [ molecules ] section of the topology file. Can you please help me to solve this problem?

Upload your topology to a file-sharing service and provide the URL to access it. 
  There's no way to know what's going on (and I recall giving some previous 
advice about line endings - have you checked this?)

-Justin

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Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 629
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

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