[gmx-users] is there any special tutorial for the interaction of nanosheet and amino acids?

Alex nedomacho at gmail.com
Wed Oct 18 21:18:54 CEST 2017


That would probably depend on the nanosheet material, the particular 
amino acid, the solvent & ionic strength, temperature, etc, etc. But no, 
there is no tutorial and yes, a "nanosheet" can be viewed as a ligand. :)

I don't know if this helps, but could you please first give us an idea 
of what you're trying to do?


On 10/18/2017 1:09 PM, rose rahmani wrote:
> Hi
> I am a beginner user of GROMACS, i want to simulate the interaction of nano
> sheet with amino acid ,but i dont know what should do, how should i behave
> with these structures ? is there any tutoroial for interaction of nano
> sheet and amino acids?
> is it like protein-ligand tutorial in GROMACS tutorial?
> with regards
> Rose

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