[gmx-users] Installation of g_mmpbsa with Gromacs 2016.3
Hermann, Johannes
J.Hermann at lrz.tu-muenchen.de
Tue Apr 17 10:47:12 CEST 2018
Dear Gromacs-Users,
I know that g_mmpbsa is not a Gromacs tool but I guess there are some
people here who installed / used it.
I want to install g_mmpbsa using my current 2016.3 gromacs gmx_mpi
installation and my already installed apbs 1.4.1.
First of all, in the installation instruction of g_mmpbsa it says, that
gromacs 4.6.x should be installed with -DGMX_GPU=off. Will it work with
my 2016.3 version, where I use gpu acceleration?
Has anyone a similar configuration and tried installation of g_mmpbsa
the following way:
cd g_mmpbsa
mkdir build
cd build
cmake -DGMX_PATH= PATH/TO/GROMACS \
-DAPBS14=on \
-DAPBS_INSTALL=PATH/TO/APBS \
-DCMAKE_INSTALL_PREFIX=/opt/g_mmpbsa \
..
make
sudo make install
Thank you very much in advance for your help!
All the best
Johannes
--
______________________________________
*Technische Universität München*
*Johannes Hermann, M.Sc.*
Lehrstuhl für Bioverfahrenstechnik
Boltzmannstr. 15
D-85748 Garching
Tel: +49 8928915730
Fax: +49 8928915714
Email: j.hermann at lrz.tum.de
http://www.biovt.mw.tum.de/
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