[gmx-users] Error in gmx trjcat

Mark Abraham mark.j.abraham at gmail.com
Wed Apr 18 10:18:36 CEST 2018


Hi,

Probably something like an upgrade of the OS or compiler version changed
the libraries that it linked to at run time and somehow the checks to
prevent such problems didn't work. If you would recompile GROMACS on that
machine, it would likely be fine.

Mark

On Wed, Apr 18, 2018, 05:37 Syed Azeem <syedazeemullah186 at gmail.com> wrote:

> >> Hey Mark,
> >>
> >> Still the same problem persists.
> >>
> >>
> >>
> > Hi,
> >
> > That looks like a broken build of GROMACS, rather than a bug in the code
> or
> > a broken file. Can you try those gmx check commands on another
> installation
> > somewhere else? (Also gmx check -m doesn't do anything useful any more,
> so
> > don't buy trouble by using it!)
>
> Hey,
>
> I tried concatenating those trajectory files in another machine (same
> version: gromacs 5.1.4). It worked well without any error.
>
> What is wrong with my own build?
>
> Best,
> Azeem
> >
> > Mark
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