[gmx-users] installing Gromacs on windows using cygwin

Mark Abraham mark.j.abraham at gmail.com
Sat Apr 21 14:22:58 CEST 2018


Hi,

Follow
http://manual.gromacs.org/documentation/current/install-guide/index.html#getting-access-to-gromacs-after-installation
which instructs you to do the same thing you must have done last time. That
has to be done from each shell, or set up to be true for all shells.

Mark

On Sat, Apr 21, 2018, 13:28 Hossein Geraili <geraili.hsn at gmail.com> wrote:

> Hi all,
> I am using Linux, and I followed the installation guide in the Gromacs page
> exactly, and it seems everything was successful for installation of Gromacs
> 2018.1. I also at the end typed "gmx pdb2gmx" and it seems that gromacs was
> installed in all the computer while using that terminal, but when I close
> the terminal and open a new one with typing the same command it gives the
> following error:
> The program 'gmx' is currently not installed. You can install it by typing:
> sudo apt install gromacs
> what is the problem??
>
>
>
>
>
>
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> On Thu, Apr 19, 2018 at 9:42 PM, Mark Abraham <mark.j.abraham at gmail.com>
> wrote:
>
> > Hi,
> >
> > Surely cygwin has its own cmake package, which you should use rather than
> > compile it yourself.
> >
> > Mark
> >
> > On Thu, Apr 19, 2018, 18:02 Hossein Geraili <geraili.hsn at gmail.com>
> wrote:
> >
> > > Hi all,
> > > I want to install Gromacs on windows 10, and I get the error while
> > > installing Cmake with cygwin. I tried two different version and the
> error
> > > is the same.
> > >
> > > gmake: *** No rule to make target '/cygdrive/h/Ph.D/Gromacs/
> > > Software/cmake-3.10.3/Source/cmAddCustomCommandCommand.cxx', needed by
> > > 'cmAddCustomCommandCommand.o'.  Stop.
> > > ---------------------------------------------
> > > Error when bootstrapping CMake:
> > > Problem while running gmake
> > >
> > > any comment would be appreciated.
> > > Best
> > >
> > >
> > > --
> > > Hosein Geraili Daronkola
> > > M.Sc.Graduated of physical chemistry
> > > Physical Chemistry,
> > > Department of Chemistry,
> > > The Sharif University of Technology.
> > > geraili_hosein at alum.sharif.edu
> > > ‌
> > > [image: Mailtrack]
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> --
> Hosein Geraili Daronkola
> M.Sc.Graduated of physical chemistry
> Physical Chemistry,
> Department of Chemistry,
> The Sharif University of Technology.
> geraili_hosein at alum.sharif.edu
> --
> Gromacs Users mailing list
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