[gmx-users] gmx traj output

Mohsen Ramezanpour ramezanpour.mohsen at gmail.com
Tue Apr 24 05:08:47 CEST 2018


Hi Gromacs users,

I am using gmx traj to get the box size (X, Y, Z).
I use the following command:

echo 0 | gmx traj  -f trajectory.xtc  -s md.tpr  -ob box.xvg  -xvg none

The output has 77 columns.
1st is the time step,

2nd, 3rd, and 4th seem to be the X, Y, and Z size of the box.
I was wondering what are the 5th, 6th, and 7th columns giving, exactly?

Cheers,
Mohsen

-- 
*Rewards work better than punishment ...*


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