[gmx-users] Force Fields
Momin Ahmad
momin.ahmad at kit.edu
Wed Apr 25 11:49:46 CEST 2018
Hi,
i have a question regarding force fields (not gromacs related). In UFF
(https://pubs.acs.org/doi/abs/10.1021/ja00051a040) the potential
equations of angles and dihedrals are different than in gromacs. OBGMX
just reparametrizes them to still use the data from UFF
(https://onlinelibrary.wiley.com/doi/abs/10.1002/jcc.23049). My question
would be what defines my dependence on the potential equations. If i
take bonded parameters from DFT-calculations and use the nonbonded from
UFF, am i allowed to just change potential equations or is this not
allowed as i am still using data from UFF (nonbonded). Bonded stretch
potential and nonbonded potentials are the same (harmonic, lennard jones).
Greets
Momin
--
Momin Ahmad
Karlsruhe Institute of Technology (KIT)
Steinbuch Centre for Computing (SCC)
Hermann-von-Helmholtz-Platz 1
76344 Eggenstein-Leopoldshafen
Phone: +49 721 608-24286
E-Mail: Momin.Ahmad at kit.edu
More information about the gromacs.org_gmx-users
mailing list