[gmx-users] strange GPU load distribution
Alex
nedomacho at gmail.com
Thu Apr 26 05:52:30 CEST 2018
Hi all,
I am running GMX 2018 with gmx mdrun -pinoffset 0 -pin on -nt 24 -ntmpi
4 -npme 1 -pme gpu -nb gpu -gputasks 1122
Once in a while the simulation slows down and nvidia-smi reports
something like this:
| 1 12981 C gmx
175MiB |
| 2 12981 C gmx
217MiB |
| 2 13083 C gmx
161MiB |
| 2 13086 C gmx
159MiB |
| 2 13089 C gmx
139MiB |
| 2 13093 C gmx
163MiB |
| 2 13096 C gmx
11MiB |
| 2 13099 C gmx
8MiB |
| 2 13102 C gmx
8MiB |
| 2 13106 C gmx
8MiB |
| 2 13109 C gmx
8MiB |
| 2 13112 C gmx
8MiB |
| 2 13115 C gmx
8MiB |
| 2 13119 C gmx
8MiB |
| 2 13122 C gmx
8MiB |
| 2 13125 C gmx
8MiB |
| 2 13128 C gmx
8MiB |
| 2 13131 C gmx
8MiB |
| 2 13134 C gmx
8MiB |
| 2 13138 C gmx
8MiB |
| 2 13141 C gmx
8MiB |
+-----------------------------------------------------------------------------+
Then goes back to the expected load. Is this normal?
Thanks,
Alex
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