[gmx-users] nano dimensions

Vidya R vidyadevi2811 at gmail.com
Fri Dec 21 14:51:06 CET 2018


Thank you for the reply.

How to carry out simulations of  a molecule in nano scale?

Thanks,
Vidya.R

On Fri, Dec 21, 2018 at 7:11 PM Justin Lemkul <jalemkul at vt.edu> wrote:

> On Fri, Dec 21, 2018 at 6:35 AM Vidya R <vidyadevi2811 at gmail.com> wrote:
>
> > Hi gromacs users,
> >
> > How to specify nano dimensions of an organic compound in the input files
> of
> > gromacs?
> >
> >
> The dimensions of a compound are not used for anything in GROMACS. If you
> mean specifying a box size, the program is editconf. Consult any basic
> tutorial for how to use it to set up a box.
>
> -Justin
>
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