[gmx-users] Secondary structure propensity.

Sundari sundi6170 at gmail.com
Fri Feb 16 09:00:21 CET 2018


Dear gromacs users,

can any one please tell me that how we get the secondary structure
propensity or secondary structure content(%) as a function of simulation
time.

I used "gmx do_dssp" but it gives me number of residues forming the
secondary structure vs simulation time. is it same thing or something
different?

Thank you in advance..


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