[gmx-users] ligand itp file doesn't have dihedral angles that including H atom

Mark Abraham mark.j.abraham at gmail.com
Wed Jan 3 18:31:54 CET 2018


Hi,

They are presumably looked up from the parameters found normally in the
force field files.

Mark

On Wed, Jan 3, 2018 at 6:22 PM MD <refmac5 at gmail.com> wrote:

> Hi Gromacs folks,
>
> I noticed the topology file of ligand from atb site doesn't have dihedral
> angles that include H. Do you know how to create a itp file that has
> hydrogen included dihedral parameters?
>
> Thanks,
>
> Ming
> --
> Gromacs Users mailing list
>
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send a mail to gmx-users-request at gromacs.org.
>


More information about the gromacs.org_gmx-users mailing list