[gmx-users] atom types consistency between atb and charmm

MD refmac5 at gmail.com
Fri Jan 5 02:25:24 CET 2018


Will do :)
Ming

On Thu, Jan 4, 2018 at 6:06 PM, Justin Lemkul <jalemkul at vt.edu> wrote:

>
>
> On 1/4/18 12:20 PM, MD wrote:
>
>> Hi Justin,
>>
>> Then what would be the solution if I need to add a modified amino acid in
>> merged.rtp and ffbonded.itp I wonder? My amino acid will have a fairly
>> large ligand covalently bonded with.
>>
>
> I've expounded upon CHARMM parametrization tools and methodology many
> times on this mailing list. Please search the archive to avoid me having to
> type out a long thesis that I've already posted many times before :)
>
>
> -Justin
>
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> Justin A. Lemkul, Ph.D.
> Assistant Professor
> Virginia Tech Department of Biochemistry
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