[gmx-users] phi/psi

[João Henriques]

Hello,

Don't know if there's a native gromacs tool to do so, but I'd use PLUMED
for this sort of thing:
https://plumed.github.io/doc-v2.3/user-doc/html/_t_o_r_s_i_o_n.html

The last example on that page shows something similar to what you want to
do. It's that simple.

P.S.: I am not affiliated with PLUMED in any way, I just find it simple and
useful for many types of analyses.

Best regards,
J

On Fri, Jan 12, 2018 at 3:43 PM, Urszula Uciechowska <
urszula.uciechowska at biotech.ug.edu.pl> wrote:

>
> Hi,
>
> How to get phi/psi angles from gromacs trajectory file? I used v.4.5.5.
>
> best
>
> Urszula
>
>
> --------------------------------------------
> Urszula Uciechowska PhD
> University of Gdansk and Medical Univesity of Gdansk
> Department of Molecular and Cellular Biology
> ul. Abrahama 58
> 80-307 Gdańsk
> Poland
>
>
> -----------------------------------------
> Ta wiadomość została wysłana z serwera Uniwersytetu Gdańskiego
> http://www.ug.edu.pl/
>
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