[gmx-users] covar warning
azbvenkat at gmail.com
Fri Jun 1 13:48:31 CEST 2018
For PCA analysis i tried to run covar tool for my task, i got following
WARNING: there are fewer frames in your trajectory than there are
degrees of freedom in your system. Only generating the first
400 out of 3564 eigenvectors and eigenvalues.
Why it generating 400 out of 3564 eigevectors, How rectify this warning ?
kindly help . (Command used : gmx_mpi covar -s prot_only-apo.pdb -f
PROTEIN.xtc -v eigenvect.trr -xpma covara.xpm)
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