June 2018 Archives by subject

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Starting: Fri Jun 1 01:47:50 CEST 2018
Ending: Sat Jun 30 18:15:27 CEST 2018
Messages: 455

[gmx-users] (no subject) Chhaya Singh
[gmx-users] (no subject) Vytautas Rakeviius
[gmx-users] -rerun input trajectory for calculating electrostatic energy Apramita Chand
[gmx-users] .mdp file for calculating surface tension of water Rana Ali
[gmx-users] .mdp file for calculating surface tension of water David van der Spoel
[gmx-users] .mdp file for calculating surface tension of water Rana Ali
[gmx-users] [EXT] Re: Water in hydrophobic core of POPC lipid bilayer Smith, Iris
[gmx-users] [EXT] Re: Water in hydrophobic core of POPC lipid bilayer Justin Lemkul
[gmx-users] [gmx-developers] How to get IEM of a protein Justin Lemkul
[gmx-users] [SPAM]: Re: Coarse Grained (Empty space In water) Samieegohar, Mohammadreza
[gmx-users] [SPAM]: Re: Coarse Grained (Empty space In water) Justin Lemkul
[gmx-users] About the "g_contacts" program for gromacs ABEL Stephane
[gmx-users] About the "g_contacts" program for gromacs Shreyas Kaptan
[gmx-users] About the "g_contacts" program for gromacs Pedro Deira
[gmx-users] AMBER ff14 RNA force field Jochen Hub
[gmx-users] AMP_itp Justin Lemkul
[gmx-users] analysis of angle between two beta sheet of martini protein cg SHAHEE ISLAM
[gmx-users] angle calculation SHAHEE ISLAM
[gmx-users] Autocorrelation functions for distance vector Apramita Chand
[gmx-users] Autocorrelation functions for distance vector David van der Spoel
[gmx-users] Box dimension rose rahmani
[gmx-users] Box dimension Alex
[gmx-users] Box dimension Mark Abraham
[gmx-users] Box dimension Alex
[gmx-users] Box dimension Mark Abraham
[gmx-users] Box dimension Alex
[gmx-users] Box dimension rose rahmani
[gmx-users] Box dimension rose rahmani
[gmx-users] Box dimension Alex
[gmx-users] Box dimension rose rahmani
[gmx-users] Box dimension rose rahmani
[gmx-users] Box dimension Viveca Lindahl
[gmx-users] breaking lipid A tail in minimization Karim Mahnam
[gmx-users] breaking lipid A tail in minimization Thomas Piggot
[gmx-users] breaking lipid A tail in minimization Thomas Piggot
[gmx-users] bundling four water molecules Alex
[gmx-users] Calculations of preferential interaction coefficient Apramita Chand
[gmx-users] Cavity in the system after NVT equilibration Alex
[gmx-users] Cavity in the system after NVT equilibration Alex
[gmx-users] Cavity in the system after NVT equilibration Shreyas Kaptan
[gmx-users] Centering the molecule spss4 at iacs.res.in
[gmx-users] Centering the molecule Mark Abraham
[gmx-users] Charge groups in poly methyl methacrylic acid Debadutta Prusty
[gmx-users] Charge groups in poly methyl methacrylic acid Alex
[gmx-users] Charge groups in poly methyl methacrylic acid David van der Spoel
[gmx-users] Coarse Grained (Empty space In water) Samieegohar, Mohammadreza
[gmx-users] Coarse Grained (Empty space In water) Kevin Boyd
[gmx-users] Compilation issue, MacOS 10.13.5 - Gromacs 2018 - CUDA 9.2 Florian Nachon
[gmx-users] Compilation issue, MacOS 10.13.5 - Gromacs 2018 - CUDA 9.2 Владимир Богданов
[gmx-users] Compilation issue, MacOS 10.13.5 - Gromacs 2018 - CUDA 9.2 Владимир Богданов
[gmx-users] Compilation issue, MacOS 10.13.5 - Gromacs 2018 - CUDA 9.2 Kevin Boyd
[gmx-users] Compilation issue, MacOS 10.13.5 - Gromacs 2018 - CUDA 9.2 Florian Nachon
[gmx-users] Compilation issue, MacOS 10.13.5 - Gromacs 2018 - CUDA 9.2 Florian Nachon
[gmx-users] Continuation of the gromacs job using gmx convert-tpr Justin Lemkul
[gmx-users] Continuation of the gromacs job using gmx convert-tpr Own 12121325
[gmx-users] Continuation of the gromacs job using gmx convert-tpr Justin Lemkul
[gmx-users] Continuation of the gromacs job using gmx convert-tpr Own 12121325
[gmx-users] Continuation of the gromacs job using gmx convert-tpr Justin Lemkul
[gmx-users] Continuation of the gromacs job using gmx convert-tpr Own 12121325
[gmx-users] Continuation of the gromacs job using gmx convert-tpr Justin Lemkul
[gmx-users] Continuation of the gromacs job using gmx convert-tpr Own 12121325
[gmx-users] Continuation of the gromacs job using gmx convert-tpr Own 12121325
[gmx-users] Continuation of the gromacs job using gmx convert-tpr Mark Abraham
[gmx-users] Continuation of the gromacs job using gmx convert-tpr Own 12121325
[gmx-users] Continuation of the gromacs job using gmx convert-tpr Mark Abraham
[gmx-users] Continuation of the gromacs job using gmx convert-tpr Own 12121325
[gmx-users] Continuation of the gromacs job using gmx convert-tpr Own 12121325
[gmx-users] Continuation of the gromacs job using gmx convert-tpr Own 12121325
[gmx-users] conversion issue from .str to .itp abhisek Mondal
[gmx-users] conversion issue from .str to .itp abhisek Mondal
[gmx-users] conversion issue from .str to .itp Justin Lemkul
[gmx-users] covar warning venkat
[gmx-users] CPMD/GROMACS wavefunction optimization limingru
[gmx-users] Dangling bond error using Amber force field. Wang, Yang
[gmx-users] Dangling bond error using Amber force field. Mark Abraham
[gmx-users] Dangling bond error using Amber force field. Wang, Yang
[gmx-users] Dangling bond error using Amber force field. Mark Abraham
[gmx-users] Dangling bond error using Amber force field. Wang, Yang
[gmx-users] Dangling bond error using Amber force field. Wang, Yang
[gmx-users] define = -DPOSRES_B?? m g
[gmx-users] define = -DPOSRES_B?? Justin Lemkul
[gmx-users] deform Alex
[gmx-users] Deuterium atoms Hermann, Johannes
[gmx-users] Deuterium atoms Vytautas Rakeviius
[gmx-users] Deuterium atoms Hermann, Johannes
[gmx-users] Deuterium atoms Justin Lemkul
[gmx-users] Deuterium atoms Hermann, Johannes
[gmx-users] Deuterium atoms Justin Lemkul
[gmx-users] Deuterium atoms Hermann, Johannes
[gmx-users] Deuterium atoms Justin Lemkul
[gmx-users] Deuterium atoms Smith, Micholas D.
[gmx-users] different PMF results using MPI Srinivasa Ramisetti
[gmx-users] different PMF results using MPI Mark Abraham
[gmx-users] different PMF results using MPI Srinivasa Ramisetti
[gmx-users] Dihedrals/Impropers Salman Zarrini
[gmx-users] Dihedrals/Impropers Justin Lemkul
[gmx-users] Dihedrals/Impropers Thomas Piggot
[gmx-users] Distance between the atoms greater than Box length Dilip.H.N
[gmx-users] Distance between the atoms greater than Box length Dilip.H.N
[gmx-users] Distance between the atoms greater than Box length Mark Abraham
[gmx-users] Distance between the atoms greater than Box length Quyen V. Vu
[gmx-users] Distance between the atoms greater than Box length Quyen V. Vu
[gmx-users] Distance between the atoms greater than Box length Mark Abraham
[gmx-users] Distance between the atoms greater than Box length Dilip.H.N
[gmx-users] Distance vector file for g_analyze: incompatibility of normal and vector Apramita Chand
[gmx-users] domain decomposition error Chhaya Singh
[gmx-users] domain decomposition error Mark Abraham
[gmx-users] Doubt regarding gmx msd sanjeet kumar singh ch16d012
[gmx-users] Doubts in combination rules 2 and 3 Apramita Chand
[gmx-users] Doubts in combination rules 2 and 3 Justin Lemkul
[gmx-users] Doubts in combination rules 2 and 3 David van der Spoel
[gmx-users] Doubts in combination rules 2 and 3 Apramita Chand
[gmx-users] Doubts in combination rules 2 and 3 Mark Abraham
[gmx-users] Doubts in g_select and g_trjconv Apramita Chand
[gmx-users] Doubts in visualisation of sdf output Apramita Chand
[gmx-users] Doubts in visualisation of sdf output Justin Lemkul
[gmx-users] Doubts in visualisation of sdf output Apramita Chand
[gmx-users] Doubts in visualisation of sdf output Justin Lemkul
[gmx-users] Doubts in visualisation of sdf output Apramita Chand
[gmx-users] Doubts in visualisation of sdf output Justin Lemkul
[gmx-users] Doubts regarding g_select Apramita Chand
[gmx-users] Error : symtab get_symtab_handle 367 not found ARNAB MUKHERJEE
[gmx-users] Error : symtab get_symtab_handle 367 not found ARNAB MUKHERJEE
[gmx-users] Error : symtab get_symtab_handle 367 not found ARNAB MUKHERJEE
[gmx-users] Error energy minimization: No such moleculetype NA Gonzalez Fernandez, Cristina
[gmx-users] Error energy minimization: No such moleculetype NA Mark Abraham
[gmx-users] Error in -rerun Apramita Chand
[gmx-users] Error running mdrun (v-5.1.4) on a linux cluster. Abhishek Acharya
[gmx-users] Error running mdrun (v-5.1.4) on a linux cluster. Mark Abraham
[gmx-users] Error running mdrun (v-5.1.4) on a linux cluster. Abhishek Acharya
[gmx-users] Essential dynamics Shreyas Kaptan
[gmx-users] Essential dynamics Kutzner, Carsten
[gmx-users] Essential dynamics Shreyas Kaptan
[gmx-users] Extension on different machines (CPU/GPU Nicolas Cheron
[gmx-users] Extension on different machines (CPU/GPU Mark Abraham
[gmx-users] Extension on different machines (CPU/GPU Nicolas Cheron
[gmx-users] fatal error with mpi Stefano Guglielmo
[gmx-users] fatal error with mpi Mark Abraham
[gmx-users] fatal error with mpi Stefano Guglielmo
[gmx-users] fatal error with mpi Mark Abraham
[gmx-users] fatal error with mpi Stefano Guglielmo
[gmx-users] fatal error with mpi Mark Abraham
[gmx-users] fatal error with mpi Stefano Guglielmo
[gmx-users] fatal error with mpi Mark Abraham
[gmx-users] Fatal error: Rerun .trr trajectory Hassan Aaryapour
[gmx-users] Fatal error: Rerun .trr trajectory Hassan Aaryapour
[gmx-users] FEL generated by dPCA and radius of gyrationa vs RMSD David van der Spoel
[gmx-users] FEL generated by dPCA and radius of gyrationa vs RMSD Seera Suryanarayana
[gmx-users] FEP from .top gathered with TOPOGROMACS from NAMD-CHARMM MD Francesco Pietra
[gmx-users] FFTW compiler error: no such instruction Mateusz Bieniek
[gmx-users] FFTW compiler error: no such instruction Mateusz Bieniek
[gmx-users] Fibril not restrained? Angelina Malagodi
[gmx-users] Fibril not restrained? Kevin Boyd
[gmx-users] Fibril not restrained? Justin Lemkul
[gmx-users] Force Field for Small Molecule Wahl, David M
[gmx-users] Force Field for Small Molecule Quyen V. Vu
[gmx-users] Force Field for Small Molecule Quyen V. Vu
[gmx-users] Force Field for Small Molecule Quyen V. Vu
[gmx-users] Force Field for Small Molecule Justin Lemkul
[gmx-users] Free Energy Calculations of Octanol in Octanol, What is the Issue? Dallas Warren
[gmx-users] Free Energy Calculations of Octanol in Octanol, What is the Issue? David van der Spoel
[gmx-users] Free Energy Calculations of Octanol in Octanol, What is the Issue? Justin Lemkul
[gmx-users] Free Energy Calculations of Octanol in Octanol, What is the Issue? Mark Abraham
[gmx-users] Free Energy Calculations of Octanol in Octanol, What is the Issue? Dallas Warren
[gmx-users] Free Energy Calculations of Octanol in Octanol, What is the Issue? Justin Lemkul
[gmx-users] from unit cell to supercell Bukunmi Akinwunmi
[gmx-users] Fwd: Centering a molecule spss4 at iacs.res.in
[gmx-users] Fwd: g_select or g_trjorder Apramita Chand
[gmx-users] Fwd: H2SO4 (H2PO4-) force field Ondrej Kroutil
[gmx-users] Fwd: H2SO4 (H2PO4-) force field Felipe Merino
[gmx-users] Fwd: H2SO4 (H2PO4-) force field David van der Spoel
[gmx-users] Fwd: Ionic liquid and CNTs Candy Deck
[gmx-users] Fwd: Ionic liquid and CNTs Alex
[gmx-users] Fwd: Ionic liquid and CNTs Candy Deck
[gmx-users] Fwd: Ionic liquid and CNTs Alex
[gmx-users] Fwd: Ionic liquid and CNTs Candy Deck
[gmx-users] g_rdf doubts Apramita Chand
[gmx-users] g_select or g_trjorder Apramita Chand
[gmx-users] g_trjorder output Apramita Chand
[gmx-users] g_trjorder output Justin Lemkul
[gmx-users] gangle command delara aghaie
[gmx-users] gangle command Justin Lemkul
[gmx-users] gmx 5.1.4, cuda9, Unsupported gpu architecture 'compute_20' Tamas Hegedus
[gmx-users] gmx 5.1.4, cuda9, Unsupported gpu architecture 'compute_20' Mark Abraham
[gmx-users] gmx 5.1.4, cuda9, Unsupported gpu architecture 'compute_20' Tamas Hegedus
[gmx-users] GMX Error after CUDA update Krzysztof Kolman
[gmx-users] GMX Error after CUDA update Mark Abraham
[gmx-users] GMX Error after CUDA update Krzysztof Kolman
[gmx-users] gmx potential for membrane electrostatic potential Sahithya S Iyer
[gmx-users] GROMACS 2018.2 patch release available Mark Abraham
[gmx-users] Gromacs do oscillatory shear/box deformation? Smith, Micholas D.
[gmx-users] GROMACS job opportunity: Scientific programmer at KTH Royal Institute of Technology (July 19 deadline) Erik Lindahl
[gmx-users] Gromacs simulation system size tm23
[gmx-users] Gromacs simulation system size Justin Lemkul
[gmx-users] Gromacs tabulated potentials for CG models Sudip Das
[gmx-users] Gromacs tabulated potentials for CG models Sudip Das
[gmx-users] Gromacs tabulated potentials for CG models Sudip Das
[gmx-users] Gromacs-fda tool scalar force value sign Yuliana Bosken
[gmx-users] gromacs.org_gmx-users Digest, Vol 169, Issue 118 niki24 at tezu.ernet.in
[gmx-users] gromacs.org_gmx-users Digest, Vol 170, Issue 27 Muthukumaran Rajagopalan
[gmx-users] gromacs.org_gmx-users Digest, Vol 170, Issue 27 Justin Lemkul
[gmx-users] gromacs.org_gmx-users Digest, Vol 170, Issue 39 Rahma Dahmani
[gmx-users] gromacs.org_gmx-users Digest, Vol 170, Issue 57 ABEL Stephane
[gmx-users] GROMACS/CPMD wavefunction optimize limingru
[gmx-users] GROMACS2016.1 Compiling with ORCA S M Bargeen Turzo
[gmx-users] GROMACS2016.1 Compiling with ORCA Justin Lemkul
[gmx-users] Groove width spss4 at iacs.res.in
[gmx-users] Groove width Alex
[gmx-users] Groove width Gregory Poon
[gmx-users] Groove width David van der Spoel
[gmx-users] Groove width mesguerran
[gmx-users] Groove width spss4 at iacs.res.in
[gmx-users] Groove width spss4 at iacs.res.in
[gmx-users] Groove width rajendra kumar
[gmx-users] Groove width spss4 at iacs.res.in
[gmx-users] Groove width spss4 at iacs.res.in
[gmx-users] Groove width rajendra kumar
[gmx-users] Groove width spss4 at iacs.res.in
[gmx-users] GTX 960 vs Tesla K40 Alex
[gmx-users] GTX 960 vs Tesla K40 paul buscemi
[gmx-users] GTX 960 vs Tesla K40 Alex
[gmx-users] GTX 960 vs Tesla K40 Alex
[gmx-users] GTX 960 vs Tesla K40 Szilárd Páll
[gmx-users] GTX 960 vs Tesla K40 Alex
[gmx-users] GTX 960 vs Tesla K40 Szilárd Páll
[gmx-users] GTX 960 vs Tesla K40 Alex
[gmx-users] GTX 960 vs Tesla K40 Szilárd Páll
[gmx-users] GTX 960 vs Tesla K40 Alex
[gmx-users] Handling PBC for Free energy calculations in plumed patched Gromacs Abhinandan Panigrahi
[gmx-users] Heavy water H-H radial distribution function Haelee Hyun
[gmx-users] Heavy water H-H radial distribution function Justin Lemkul
[gmx-users] Heavy water H-H radial distribution function Justin Lemkul
[gmx-users] help me in understanding PCA Upendra N
[gmx-users] help me in understanding PCA Upendra N
[gmx-users] Hessian matrix within gmx mdrun Adriaan Riet
[gmx-users] Hexagonal Phase modelling Anjana Jayasinghe
[gmx-users] Hexagonal Phase modelling David van der Spoel
[gmx-users] High pressure Alex
[gmx-users] High pressure Shreyas Kaptan
[gmx-users] High pressure Alex
[gmx-users] High pressure Shreyas Kaptan
[gmx-users] How can I measure RDC fitness? Hanin Omar
[gmx-users] How to add distance and angle restraints in the topology file? Qing Liu
[gmx-users] How to add distance and angle restraints in the topology file? Qing Liu
[gmx-users] How to add distance and angle restraints in the topology file? Qinghua Liao
[gmx-users] How to add distance and angle restraints in the topology file? Justin Lemkul
[gmx-users] How to define a vector for gangle command delara aghaie
[gmx-users] How to define a vector for gangle command delara aghaie
[gmx-users] How to generate multiple diverse trajectories from one checkpoint file Bin Zhang
[gmx-users] how to improve computing? Владимир Богданов
[gmx-users] how to improve computing? Alex
[gmx-users] how to improve computing? Szilárd Páll
[gmx-users] how to improve computing? Владимир Богданов
[gmx-users] how to improve computing? Владимир Богданов
[gmx-users] How to select atoms between 2 molecules and then calculate rdf 1185201182
[gmx-users] how to set temperature-lambdas Qasim Pars
[gmx-users] Implicit solvent Chhaya Singh
[gmx-users] Implicit solvent Chhaya Singh
[gmx-users] Implicit solvent Mark Abraham
[gmx-users] implicit solvent error Chhaya Singh
[gmx-users] implicit solvent error Alex
[gmx-users] implicit solvent error Chhaya Singh
[gmx-users] implicit solvent error Alex
[gmx-users] implicit solvent error Chhaya Singh
[gmx-users] Increase of 5-helix count Sundari
[gmx-users] Increase of 5-helix count Sundari
[gmx-users] Increase of 5-helix count Mark Abraham
[gmx-users] Increase of 5-helix count Mark Abraham
[gmx-users] increasing md run speed neelam wafa
[gmx-users] increasing md run speed Mark Abraham
[gmx-users] increasing md run speed Mark Abraham
[gmx-users] increasing md run speed neelam wafa
[gmx-users] increasing md run speed Mark Abraham
[gmx-users] Invalid order for directive atomtypes for ligands Qasim Pars
[gmx-users] Invalid order for directive atomtypes for ligands Justin Lemkul
[gmx-users] Is the Amber14sb ff on the gromacs website actually amber14sb force field Evelyne Deplazes
[gmx-users] Is the Amber14sb ff on the gromacs website actually amber14sb force field Quyen V. Vu
[gmx-users] keep the size of simulation box constant in one direction 凌未风
[gmx-users] keep the size of simulation box constant in one direction Alex
[gmx-users] Lennrd-Jones potential in Gromos force field kordzadeh at aut.ac.ir
[gmx-users] Lennrd-Jones potential in Gromos force field Mark Abraham
[gmx-users] Lennrd-Jones potential in Gromos force field kordzadeh at aut.ac.ir
[gmx-users] Lennrd-Jones potential in Gromos force field Justin Lemkul
[gmx-users] Lennrd-Jones potential in Gromos force field kordzadeh at aut.ac.ir
[gmx-users] Lennrd-Jones potential in Gromos force field Justin Lemkul
[gmx-users] Lennrd-Jones potential in Gromos force field kordzadeh at aut.ac.ir
[gmx-users] Lennrd-Jones potential in Gromos force field kordzadeh at aut.ac.ir
[gmx-users] Lennrd-Jones potential in Gromos force field Mark Abraham
[gmx-users] Lennrd-Jones potential in Gromos force field kordzadeh at aut.ac.ir
[gmx-users] Lennrd-Jones potential in Gromos force field Mark Abraham
[gmx-users] Lennrd-Jones potential in Gromos force field Alex
[gmx-users] Lennrd-Jones potential in Gromos force field Mark Abraham
[gmx-users] Lennrd-Jones potential in Gromos force field kordzadeh at aut.ac.ir
[gmx-users] Looking for a Gromacs' tool to find lipid molecules which are located in a shell in the x-y plane around a drug molecule intercalated in a bilayer Thomas Piggot
[gmx-users] Magnetic field in GROMACS David van der Spoel
[gmx-users] Magnetic field in GROMACS Alex
[gmx-users] Magnetic field in GROMACS David van der Spoel
[gmx-users] Magnetic field in GROMACS Ali Ahmed
[gmx-users] Magnetic field in GROMACS حبيبة علي
[gmx-users] Magnetic field in GROMACS Alex
[gmx-users] Magnetic field in GROMACS حبيبة علي
[gmx-users] Magnetic field in GROMACS Alex
[gmx-users] Magnetic field in GROMACS حبيبة علي
[gmx-users] md simulation of oil hydrocarbon Vytautas Rakeviius
[gmx-users] mdp-settings for charmm36 and lipid apl values Muthukumaran Rajagopalan
[gmx-users] mdp-settings for charmm36 and lipid apl values Justin Lemkul
[gmx-users] mdrun -rerun venkat
[gmx-users] mdrun -rerun Mark Abraham
[gmx-users] mdrun -rerun Mark Abraham
[gmx-users] membrane-protein system by using charmm36 ff Olga Press
[gmx-users] membrane-protein system by using charmm36 ff Shreyas Kaptan
[gmx-users] membrane-protein system by using charmm36 ff Olga Press
[gmx-users] membrane-protein system by using charmm36 ff Alex
[gmx-users] membrane-protein system by using charmm36 ff Alex
[gmx-users] membrane-protein system by using charmm36 ff Olga Press
[gmx-users] membrane-protein system by using charmm36 ff Shreyas Kaptan
[gmx-users] membrane-protein system by using charmm36 ff Alex
[gmx-users] Methodology of dPCA Seera Suryanarayana
[gmx-users] name of the residue contact between two proteins SHAHEE ISLAM
[gmx-users] name of the residue contact between two proteins SHAHEE ISLAM
[gmx-users] No line with moleculetype 'SOL' found the [ molecules ] section Gonzalez Fernandez, Cristina
[gmx-users] No line with moleculetype 'SOL' found the [ molecules ] section Justin Lemkul
[gmx-users] No line with moleculetype 'SOL' found the [ molecules ] section Gonzalez Fernandez, Cristina
[gmx-users] non-bounded parameters Neda Rafiee
[gmx-users] nvt.mdp for water surface tension Rana Ali
[gmx-users] Only 2 ns/day Alex
[gmx-users] Only 2 ns/day Kevin Boyd
[gmx-users] opnempi Stefano Guglielmo
[gmx-users] opnempi Benson Muite
[gmx-users] opnempi Stefano Guglielmo
[gmx-users] opnempi Stefano Guglielmo
[gmx-users] opnempi Mark Abraham
[gmx-users] Partial charges rose rahmani
[gmx-users] Partial charges Alex
[gmx-users] PhD position available in Lyon (France) Luca Monticelli
[gmx-users] Position restrain in umbrella sampling rose rahmani
[gmx-users] Position restrain in umbrella sampling Justin Lemkul
[gmx-users] Position restrain in umbrella sampling rose rahmani
[gmx-users] Potential energy reported by gmx energy command atb files
[gmx-users] Potential energy reported by gmx energy command David van der Spoel
[gmx-users] Principal component analysis Upendra N
[gmx-users] Problem in generation of tpr file Rahma Dahmani
[gmx-users] Problem in generation of tpr file Alex
[gmx-users] Problem in generation of tpr file Justin Lemkul
[gmx-users] Problem in generation of tpr file Alex
[gmx-users] Problem in generation of tpr file Justin Lemkul
[gmx-users] Problem with freeze groups Ondrej Kroutil
[gmx-users] Protein potential energy Ming Tang
[gmx-users] Protein potential energy Justin Lemkul
[gmx-users] protein with ions Владимир Богданов
[gmx-users] protein with ions Justin Lemkul
[gmx-users] Protein-surface Binding energy Neda Rafiee
[gmx-users] Pulled group moves randomly while doing umbrella sampling Chenlin Lu
[gmx-users] Pulled group moves randomly while doing umbrella sampling Chenlin Lu
[gmx-users] Pulled group moves randomly while doing umbrella sampling Chenlin Lu
[gmx-users] question about Gromacs 5.0.4 build Susan Chacko
[gmx-users] Question regarding running Gromacs new graphics card on Centos Tony Myung Keun Cho
[gmx-users] Question regarding running Gromacs new graphics card on Centos Mark Abraham
[gmx-users] Question regarding running Gromacs new graphics card on Centos Mark Abraham
[gmx-users] Questions about the output of the pulling code 1185201182
[gmx-users] radial distribution function kordzadeh at aut.ac.ir
[gmx-users] Reg. thread MPI errror with gromacs-2016.4 "가디 장데부 고라크스나트"
[gmx-users] Reg. thread MPI errror with gromacs-2016.4 "가디 장데부 고라크스나트"
[gmx-users] Regarding -nmol option Apramita Chand
[gmx-users] Regarding -nmol option Justin Lemkul
[gmx-users] regarding free energy perturbation zhangw
[gmx-users] regarding free energy perturbation zhangw
[gmx-users] Regarding rigidity of water models Dilip.H.N
[gmx-users] Regarding rigidity of water models João Henriques
[gmx-users] regarding rmsd calculation SHAHEE ISLAM
[gmx-users] regarding rmsd calculation Justin Lemkul
[gmx-users] regarding rmsd calculation SHAHEE ISLAM
[gmx-users] regarding rmsd calculation SHAHEE ISLAM
[gmx-users] regarding rmsd calculation Justin Lemkul
[gmx-users] Regarding the code for HB auto-correlation function code David van der Spoel
[gmx-users] Regarding wall settings in CG MD Mijiddorj B
[gmx-users] Regarding walls in CG MD Mijiddorj B
[gmx-users] related to box dimension : solvate protein-ligand complex Seketoulie Keretsu
[gmx-users] related to box dimension : solvate protein-ligand complex Quyen V. Vu
[gmx-users] related to box dimension : solvate protein-ligand complex Quyen V. Vu
[gmx-users] related to box dimension : solvate protein-ligand complex Justin Lemkul
[gmx-users] REMD Eric Smoll
[gmx-users] Restarting the job on a remote cluster sai manohar
[gmx-users] Restarting the job on a remote cluster Quyen V. Vu
[gmx-users] Rupture force definition Rakesh Mishra
[gmx-users] Rupture force definition Justin Lemkul
[gmx-users] Rupture force definition Rakesh Mishra
[gmx-users] Rupture force definition Justin Lemkul
[gmx-users] S-nitrosoylated proteins Amir Zeb
[gmx-users] S-nitrosoylated proteins Vytautas Rakeviius
[gmx-users] secondary structure element constraining alex rayevsky
[gmx-users] secondary structure element constraining Justin Lemkul
[gmx-users] secondary structure element constraining alex rayevsky
[gmx-users] secondary structure element constraining alex rayevsky
[gmx-users] secondary structure element constraining Justin Lemkul
[gmx-users] secondary structure query SHAHEE ISLAM
[gmx-users] secondary structure query Soham Sarkar
[gmx-users] secondary structure query SHAHEE ISLAM
[gmx-users] secondary structure query Justin Lemkul
[gmx-users] secondary structure query SHAHEE ISLAM
[gmx-users] semiisotropic pressure coupling error Oguz Gurbulak
[gmx-users] semiisotropic pressure coupling error Justin Lemkul
[gmx-users] Shell (Drude) model for polarization in GROMACS Eric Smoll
[gmx-users] Shell (Drude) model for polarization in GROMACS Justin Lemkul
[gmx-users] Shell (Drude) model for polarization in GROMACS Eric Smoll
[gmx-users] Shell (Drude) model for polarization in GROMACS Justin Lemkul
[gmx-users] Shell (Drude) model for polarization in GROMACS Eric Smoll
[gmx-users] Shell (Drude) model for polarization in GROMACS Justin Lemkul
[gmx-users] some confusion about cut-off radius in parameters 张明敏
[gmx-users] some confusion about cut-off radius in parameters Mark Abraham
[gmx-users] spatial restraints Stefano Guglielmo
[gmx-users] spatial restraints Simon Kit Sang Chu
[gmx-users] spatial restraints Stefano Guglielmo
[gmx-users] spc.itp file and flexspc.itp Anjana Jayasinghe
[gmx-users] spc.itp file and flexspc.itp Justin Lemkul
[gmx-users] spc.itp file and flexspc.itp Anjana Jayasinghe
[gmx-users] spc.itp file and flexspc.itp Justin Lemkul
[gmx-users] Surface tension calculations via gmx energy? Own 12121325
[gmx-users] Surface Tension: equation and tail corrections? Eric Smoll
[gmx-users] Thread-MPI error in GROMACS-2018 Siva Dasetty
[gmx-users] Thread-MPI error in GROMACS-2018 Mark Abraham
[gmx-users] tilt angle Fa Hamedi
[gmx-users] tilt angle Shreyas Kaptan
[gmx-users] total energy of a protein Saumyak Mukherjee
[gmx-users] total energy of a protein Justin Lemkul
[gmx-users] Umbrella saming rose rahmani
[gmx-users] Umbrella sampling rose rahmani
[gmx-users] Unable to make install Gromacs on Cygwin Matthew Fisher
[gmx-users] Unable to make install Gromacs on Cygwin Shrinath Kumar
[gmx-users] Unable to make install Gromacs on Cygwin Shrinath Kumar
[gmx-users] Updated tutorials and new website Justin Lemkul
[gmx-users] Updated tutorials and new website paul buscemi
[gmx-users] Updated tutorials and new website Mark Abraham
[gmx-users] Use different version of tpr in the same simulation... possible ? ABEL Stephane
[gmx-users] Use different version of tpr in the same simulation... possible ? Justin Lemkul
[gmx-users] Virtual sites causing npt simulation instabilities Eisenhart, Andrew (eisenhaw)
[gmx-users] Virtual sites causing npt simulation instabilities Justin Lemkul
[gmx-users] Virtual sites causing npt simulation instabilities Eisenhart, Andrew (eisenhaw)
[gmx-users] Virtual sites causing npt simulation instabilities Justin Lemkul
[gmx-users] Virtual sites causing npt simulation instabilities Eisenhart, Andrew (eisenhaw)
[gmx-users] Virtual sites causing npt simulation instabilities Justin Lemkul
[gmx-users] Virtual sites causing npt simulation instabilities Eisenhart, Andrew (eisenhaw)
[gmx-users] Virtual sites causing npt simulation instabilities Justin Lemkul
[gmx-users] Wall parameters Mijiddorj B
[gmx-users] water flow Alex
[gmx-users] water flow Justin Lemkul
[gmx-users] water flow Alex
[gmx-users] water flow Justin Lemkul
[gmx-users] water flow Alex
[gmx-users] water flow Alex
[gmx-users] Water in hydrophobic core of POPC lipid bilayer Smith, Iris
[gmx-users] Water in hydrophobic core of POPC lipid bilayer Dallas Warren
[gmx-users] What are SAsteps? Rafa Risnik
[gmx-users] Why do g_trjconv and g_select give different results for the same cut-off Apramita Chand
[gmx-users] Why do g_trjconv and g_select give different results for the same cut-off Mark Abraham

Last message date: Sat Jun 30 18:15:27 CEST 2018
Archived on: Sat Jun 30 18:15:28 CEST 2018

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