[gmx-users] gangle command

delara aghaie d_aghaie at yahoo.com
Sun Jun 3 14:55:03 CEST 2018


 Dear Gromacs users
I want to calculate the angle between P-N vector in the head group of DPPC molecules with the z-axis (bilayer normal) using gangle command.I know that for the z axis I should use (-g2 z) but do not know how to define a vector for P-N. Your help would be greatly appreciated.

Regards 
Delara





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