[gmx-users] Restarting the job on a remote cluster

[Quyen V. Vu]

Hi,


> I had two MD simulations running on a remote cluster through my putty
> session. One for 50 ns and the other for 30 ns. However, due to an
> unfortunate event, my session was closed as the windows machine shut down.
> I have two questions now.
>
> 1. How do I find out until where the simulation was completed?
> ​
>

​you can check on your simulation *.log file
​


> ​
>
> 2. How do I continue the MD run if possible, from where the run stopped
> abruptly?
>
​http://www.gromacs.org/Documentation/How-tos/Doing_Restarts
GROMACS will use the checkpoint to restrat the simulation​

​Best,
Quyen​