[gmx-users] gromacs 2018.1 installation

Jo jojo412202 at gmail.com
Wed Mar 21 19:28:30 CET 2018


Hello,

I have had some errors with the v2018.1 installation make check.  Any
suggestions on what I can do?

 8/39 Test  #8: FFTUnitTests .....................***Exception: SegFault
0.01 sec
[==========] Running 14 tests from 4 test cases.
[----------] Global test environment set-up.
[----------] 2 tests from ManyFFTTest
[ RUN      ] ManyFFTTest.Complex1DLength48Multi5Test

.
.
.

26/39 Test #26: CorrelationsTest .................***Exception: SegFault
0.10 sec
[==========] Running 21 tests from 3 test cases.
[----------] Global test environment set-up.
[----------] 10 tests from AutocorrTest
[ RUN      ] AutocorrTest.EacNormal
[       OK ] AutocorrTest.EacNormal (79 ms)
[ RUN      ] AutocorrTest.EacNoNormalize

.
.
.

95% tests passed, 2 tests failed out of 39

Label Time Summary:
GTest              =   9.06 sec (33 tests)
IntegrationTest    =   6.36 sec (3 tests)
MpiTest            =   0.21 sec (3 tests)
UnitTest           =   2.70 sec (30 tests)

Total Test time (real) = 163.71 sec

The following tests FAILED:
  8 - FFTUnitTests (SEGFAULT)
26 - CorrelationsTest (SEGFAULT)
Errors while running CTest
CMakeFiles/run-ctest-nophys.dir/build.make:57: recipe for target
'CMakeFiles/run-ctest-nophys' failed
make[3]: *** [CMakeFiles/run-ctest-nophys] Error 8
CMakeFiles/Makefile2:1160: recipe for target
'CMakeFiles/run-ctest-nophys.dir/all' failed
make[2]: *** [CMakeFiles/run-ctest-nophys.dir/all] Error 2
CMakeFiles/Makefile2:971: recipe for target 'CMakeFiles/check.dir/rule'
failed
make[1]: *** [CMakeFiles/check.dir/rule] Error 2
Makefile:546: recipe for target 'check' failed
make: *** [check] Error 2


Thanks,

Jo


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