[gmx-users] gromacs 2018.1 installation

[Mark Abraham]

Hi,

Thanks - we need some more information to be able to help. What does
bin/gmx -version report?

Mark

On Wed, Mar 21, 2018, 19:28 Jo <jojo412202 at gmail.com> wrote:

> Hello,
>
> I have had some errors with the v2018.1 installation make check.  Any
> suggestions on what I can do?
>
>  8/39 Test  #8: TUnitTests .....................***Exception: SegFault
> 0.01 sec
> [==========] Running 14 tests from 4 test cases.
> [----------] Global test environment set-up.
> [----------] 2 tests from ManyFFTTest
> [ RUN      ] ManyFFTTest.Complex1DLength48Multi5Test
>
> .
> .
> .
>
> 26/39 Test #26: CorrelationsTest .................***Exception: SegFault
> 0.10 sec
> [==========] Running 21 tests from 3 test cases.
> [----------] Global test environment set-up.
> [----------] 10 tests from AutocorrTest
> [ RUN      ] AutocorrTest.EacNormal
> [       OK ] AutocorrTest.EacNormal (79 ms)
> [ RUN      ] AutocorrTest.EacNoNormalize
>
> .
> .
> .
>
> 95% tests passed, 2 tests failed out of 39
>
> Label Time Summary:
> GTest              =   9.06 sec (33 tests)
> IntegrationTest    =   6.36 sec (3 tests)
> MpiTest            =   0.21 sec (3 tests)
> UnitTest           =   2.70 sec (30 tests)
>
> Total Test time (real) = 163.71 sec
>
> The following tests FAILED:
>   8 - FFTUnitTests (SEGFAULT)
> 26 - CorrelationsTest (SEGFAULT)
> Errors while running CTest
> CMakeFiles/run-ctest-nophys.dir/build.make:57: recipe for target
> 'CMakeFiles/run-ctest-nophys' failed
> make[3]: *** [CMakeFiles/run-ctest-nophys] Error 8
> CMakeFiles/Makefile2:1160: recipe for target
> 'CMakeFiles/run-ctest-nophys.dir/all' failed
> make[2]: *** [CMakeFiles/run-ctest-nophys.dir/all] Error 2
> CMakeFiles/Makefile2:971: recipe for target 'CMakeFiles/check.dir/rule'
> failed
> make[1]: *** [CMakeFiles/check.dir/rule] Error 2
> Makefile:546: recipe for target 'check' failed
> make: *** [check] Error 2
>
>
> Thanks,
>
> Jo
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