[gmx-users] Parameters in top

Dawid das addiw7 at googlemail.com
Thu Mar 29 09:33:14 CEST 2018


Dear Gromacs Users,

If I have some bonding parameters defined in aminoacids.rtp instead of
ffbonded.itp
I noticed that these parameters appear in my topology *top file.

If I change these parameters in *top file but not in aminoacids.rtp, and
get new *trp file with grompp will my parameters also change? In other words
parameters in *top are taken as they are by Gromacs or still they are taken
from the force field files?

Best wishes,
Dawid


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