[gmx-users] Parameters in top

Joe Jordan e.jjordan12 at gmail.com
Thu Mar 29 09:36:55 CEST 2018


Perhaps this is a good chance for some testing or your part =)

On Thu, Mar 29, 2018 at 9:33 AM, Dawid das <addiw7 at googlemail.com> wrote:

> Dear Gromacs Users,
>
> If I have some bonding parameters defined in aminoacids.rtp instead of
> ffbonded.itp
> I noticed that these parameters appear in my topology *top file.
>
> If I change these parameters in *top file but not in aminoacids.rtp, and
> get new *trp file with grompp will my parameters also change? In other
> words
> parameters in *top are taken as they are by Gromacs or still they are taken
> from the force field files?
>
> Best wishes,
> Dawid
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-- 
Joe Jordan


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