[gmx-users] Parameter generation

Rakesh Mishra rockinbhu at gmail.com
Fri Nov 2 07:10:28 CET 2018

Dear all

Can any one tell that how to generate parameters for the co-covalently
bonded ligand and bases of DNA in order to run the simulation using Gromacs
.  For  ligand+DNA having hydrogen bonding , there is no problem.  But  we
are not getting that how to generate parameters for co-covalently bonded
"ligand + DNA"  Can any one help for this issue.


*With Best-Rakesh Kumar Mishra*
*  (RA)CSD  SINP Kolkata, India*

*E-mail - rakesh.mishra at saha.ac.in <rakesh.mishra at saha.ac.in> *

*Phone n. +91 9473662491, +918777496532*

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