mark.j.abraham at gmail.com
Tue Nov 20 16:17:57 CET 2018
Please try to use a descriptive subject for your email... you'll have a
better chance of getting the help you actually want ;-)
On Tue, Nov 20, 2018 at 3:40 PM Emmanuel Broni <ebroni002 at st.ug.edu.gh>
> Hello Gromax Users,
> I was running a 100ns MD simulation on an hpc and it was terminated with
> the following comments in the log file. What does it mean and what do I do?
Probably your HPC allocation ran out of time and the job scheduler asked it
to stop with a TERM signal, so it did. You can now do a normal checkpoint
restart at your leisure.
> DD step 39 load imb.: force 17.8% pme mesh/force 0.925
> step 120 Turning on dynamic load balancing, because the performance loss
> due to load imbalance is 11.1 %.
> DD step 49999 vol min/aver 0.776 load imb.: force 1.6% pme mesh/force
> Received the TERM signal, stopping within 40 steps
> Step Time
> 51320 102.64000
> Writing checkpoint, step 51320 at Tue Nov 20 15:38:13 2018
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