[gmx-users] g++ compiling with gromacs library

Kit Sang Chu kschu at ucdavis.edu
Wed Nov 21 21:56:35 CET 2018


Somehow the problem persists. Here I try -l
/home/simon/Softs/gromacs5-1/opt/include again.

g++ -l /home/simon/Softs/gromacs-5.1/opt/include GlyRot.cpp -o GlyRot.o
-Wall -c
GlyRot.cpp:8:10: fatal error: gromacs/commandline.h: No such file or
directory
 #include "gromacs/commandline.h"
          ^~~~~~~~~~~~~~~~~~~~~~~
compilation terminated.


Regards,
Simon


On Wed, Nov 21, 2018 at 12:18 PM Alexander Tzanov <
Alexander.Tzanov at csi.cuny.edu> wrote:

> Use -I/path to your include directory in CFLAGS.
>
> On Nov 21, 2018 2:59 PM, David van der Spoel <spoel at xray.bmc.uu.se> wrote:
> Den 2018-11-21 kl. 19:09, skrev Kit Sang Chu:
> > Hi everyone,
> >
> > I have a Makefile from my colleague and I am trying to make it compile. I
> > have given the library path but the problem persists.
> >
> > g++ -I /home/simon/Softs/gromacs-5.1/opt GlyRot.cpp -o GlyRot.o -Wall -c
>
> -I /home/simon/Softs/gromacs-5.1/opt/include
>
> > GlyRot.cpp:8:10: fatal error: gromacs/commandline.h: No such file or
> > directory
> >   #include "gromacs/commandline.h"
> >            ^~~~~~~~~~~~~~~~~~~~~~~
> > compilation terminated.
> >
> > I understand it is a simple compile error. Still it would be great to
> know
> > the answer here. Thanks in advance.
> >
> > Simon
> >
>
>
> --
> David van der Spoel, Ph.D., Professor of Biology
> Head of Department, Cell & Molecular Biology, Uppsala University.
> Box 596, SE-75124 Uppsala, Sweden. Phone: +46184714205.
> http://www.icm.uu.se
> --
> Gromacs Users mailing list
>
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send a mail to gmx-users-request at gromacs.org.
> --
> Gromacs Users mailing list
>
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send a mail to gmx-users-request at gromacs.org.
>


More information about the gromacs.org_gmx-users mailing list