[gmx-users] Gmx distance

rose rahmani rose.rhmn93 at gmail.com
Mon Nov 26 15:16:19 CET 2018


I use gmx distance -dist 1.5 -f -s -n -o dist.xvg and select ZnS and
Protein-H groups.
Why i couldn't get any output file? Ot is processing during analuzing but
it doesn't have any dist.xvg and output file. When i use option -lt the
lifetime.xvg is empty. But i know there are distances closer than 1.5 nm
between ZnS and all non-hydrogwm atoms. How could it be possible?
I will be appreciatex if you help me.

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