[gmx-users] Stacking

[Justin Lemkul]

On 11/27/18 10:53 PM, Bratin Kumar Das wrote:
> Dear all,
>               I have one pdb structure obtained from the solution NMR. It is
> a peptide fragment. I want to stack it for studying aggression studies. How
> I can do that. Any suggestions are highly appreciable.

Use editconf to manipulate the coordinates (rotate, translate) and 
concatenate the coordinate files with cat.

-Justin

-- 
==================================================

Justin A. Lemkul, Ph.D.
Assistant Professor
Office: 301 Fralin Hall
Lab: 303 Engel Hall

Virginia Tech Department of Biochemistry
340 West Campus Dr.
Blacksburg, VA 24061

jalemkul at vt.edu | (540) 231-3129
http://www.thelemkullab.com

==================================================