[gmx-users] How to use the readHBmap for Hbond analysis?

mmousivand93 mmousivand93 at ut.ac.ir
Sun Sep 2 01:29:59 CEST 2018


Dear all users 

Hi, I have run molecular dynamic for SSDNA-Ligand (50ns), I am going to
determin the most efficient interactions(the Hbond and non-bonded
interactions )  observed during 50 ns molecular dynamic simulations in
ssDNA-ligand complex by readHBmap.I downloaded the file readHBmap.tar.gz
but I do not know how to perform the other steps. 

Best regards 

Maryam


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