[gmx-users] Per species g_energy value

Apramita Chand apramita.chand at gmail.com
Sun Sep 2 17:17:02 CEST 2018


Dear All,
In my simulation system, I have one peptide with 10 cosolvent molecules and
989 water molecules. I want to have an idea of the interactions energies
between peptide-water, peptide-cosolvent etc. Using g_energy , if I obtain
a total of -687kJ interaction energy between peptide-water, should I divide
the value by no. of water molecules to get the value per water molecule? Or
is it a 'per peptide' value and cannot be divided by no.of water molecules?
Please help.
Yours sincerely
Apramita Chand


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