[gmx-users] How can i calculate the (ADF)angular distribution of the angles between water molecule water and surface?

[rose rahmani]

Thank you Joao,

On Wed, 12 Sep 2018, 14:04 João Henriques, <joao.m.a.henriques at gmail.com>
wrote:

> Dear Rose,
>
> Spamming is not the answer. There have been quite a few threads about this
> subject in the recent past. Searching the mailing list before posting is
> usually good practice. If then something remains unclear, please feel free
> to ask. I remember having quite long discussions with a Dilip H. N. about
> this subject (on and off the mailing list).
>
> A simple query fetched 26 results:
>
> https://www.mail-archive.com/search?l=gromacs.org_gmx-users%40maillist.sys.kth.se&q=dilip+h+n+angle&x=0&y=0

I search and read about but it didn't help me. It gives me the histogram of
angles but what i really want is the distribituion of special defined
angle(between two plane) during simulation. I refer you ahain to
https://www.researchgate.net/post/How_can_i_calculate_the_ADFangular_distribution_of_the_angles_between_water_molecule_water_and_surface?_ec=topicPostOverviewAuthoredQuestions&_sg=hV7QNgmmW-MkZF5OKfgZlaI5O0G5HeVQGSGoneQ1gDaXV_96qBhs2Re6IrsBNcXYMTf0FzIqXPyDrI9r.8ylTJZVEy00BT4mPuq0m2nGK5dREPBjukd2plNMaXf5ocFCOJCRriPhzJum_Vt2KLoZVmTZVBDoQZQOcBKAP8EU

https://www.researchgate.net/post/How_can_i_calculate_the_distribution_of_water_polarization_above_surface

 I asked different questions several times last 2 days and i thought my
email doesn't recieve and share in mailing-list.

I'm really confused about what people suggest. I'm a student and i think, i
clearly explained what i want after huge searches, it's not because of
indolence and i would be appreciated if any one could answer me.

Regards



> Play with the query a bit and it should get you a lot of info on your
> problem.
>
> Best regards,
> João
>
>
>
>
>
> On Mon, Sep 10, 2018 at 10:29 AM rose rahmani <rose.rhmn93 at gmail.com>
> wrote:
>
> > Hi,
> > How can i calculate the angular distribution of the angles between water
> > molecule water and surface? surface during molecular dynamics simulation?
> >  is it possible by GROMACS? gmx gangle?
> >
> > would you please help me?
> >
> > To be clear; i refer you to these plots
> >
> >
> https://www.researchgate.net/post/How_can_i_calculate_the_ADFangular_distribution_of_the_angles_between_water_molecule_water_and_surface
> >
> >
> > Best regards
> >
> > Rose
> > --
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