[gmx-users] Pore size calculation

[Никита Шалин]

Sorry, but I am not Rahul


>Вторник, 12 марта 2019, 16:27 +03:00 от pbuscemi at q.com:
>
>Rahul,
>
>What do you mean by pore size?  A hole in the membrane caused by external
>tension ?  The space occupied by the protein ? Does lipid occupy the walls
>of the pore ?
>
>Paul
>
>-----Original Message-----
>From:  gromacs.org_gmx-users-bounces at maillist.sys.kth.se
>< gromacs.org_gmx-users-bounces at maillist.sys.kth.se > On Behalf Of RAHUL
>SURESH
>Sent: Tuesday, March 12, 2019 6:23 AM
>To:  gmx-users at gromacs.org
>Subject: [gmx-users] Pore size calculation
>
>Hi. I have a Protein_POPC bilayer system, simulated for 1000ns.
>
>Is it possible to calculate the pore size of the membrane protein?
>I tried a tool gmx_hole, but ended up with an unnotified error.
>
>Can anyone help me with this?
>
>Thanks in advance
>-- 
>*Regards,*
>*Rahul *
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-- 
Искренне Ваш, Никита Шалин