[gmx-users] Average rmsd

[neelam wafa]

ok thanks i'll try this

Regards

On Mon, Apr 29, 2019 at 5:23 AM Justin Lemkul <jalemkul at vt.edu> wrote:

>
>
> On 4/25/19 8:49 AM, neelam wafa wrote:
> > Hi!
> > I have run 5ns simulation of protein ligand complex and got its rmsd plot
> > using gmx_rms. How can i get average rmsd value for this simulation. Is
> it
> > to be taken from xmgrace graph or there is any way to calculate it? U
> cant
> > find it in log file.
>
> You can get the average of any data series (as well as other statistical
> analysis) with gmx analyze.
>
> -Justin
>
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> Justin A. Lemkul, Ph.D.
> Assistant Professor
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