[gmx-users] gromacs make check failure

Nelson Chris AWE Chris.Nelson at awe.co.uk
Mon May 20 16:26:49 CEST 2019

Hi All,
I've built gromacs on an Intel x86_64 server with GCC 7.2.0 and OpenMPI

When I run make check, I get a failure on test 29:

29 - GmxPreprocessTests (Timeout)

Any advice would be much appreciated.

Links to output files:

  1.  Build environment (https://drive.google.com/open?id=1tBs6scDqR_gJLtBRzpxMSEdbWwxYR5ks )
  2.  Build output (https://drive.google.com/open?id=1PQFllv49M-Op6HLtdKsRJfwHbFeEsint )
  3.  Dependency list (https://drive.google.com/open?id=13rETIX_ejMs1DPBGcTdsQfWKeYFNwd7T )
  4.  Make checkout output (https://drive.google.com/open?id=1YpAEbPSj0eEe2JERbL6OIc49Gd5e57a1 )
  5.  mdrun - version output (https://drive.google.com/open?id=1qu44Mk_aLz3d65YldDKo5mMtvJVyvb6D )

Kind regards,

Christopher J. Nelson
High Performance Computing
Direct: +44(0)118 98 55021
F161.1, AWE, Aldermaston, Reading, RG7 4PR, UK

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