[gmx-users] generating Doxygen documentation

Benson Muite benson_muite at emailplus.org
Wed Feb 12 19:51:34 CET 2020


Hi,
What platform are you building on? Last time I tried this, there were a few extra dependencies I needed to install.
Benson

On Thu, Feb 13, 2020, at 12:34 AM, Mark Abraham wrote:
> Hi,
> 
> When they succeed, the doxygen targets produce files like
> 
> $builddir/docs/html/doxygen/html-*/index.xhtml
> 
> which you can open in your browser. The doxygen for the released versions
> is on the web however, so it's much easier to just use or refer to that.
> 
> Mark
> 
> On Wed, 12 Feb 2020 at 16:30, Michele Pellegrino <micpel at kth.se> wrote:
> 
> > Hi,
> >
> >
> > I am trying to generate the Doxygen documentation for GROMACS from the
> > files in /docs/doxygen.
> >
> > I following 2020 manual, I run 'make doxygen-all' in the build directory,
> > succesfully; I don't know what to do next: I tried to run cmake in the
> > doxygen directory to generate the Doxyfiles, but I get the following errors:
> >
> > """
> >
> > CMake Error at CMakeLists.txt:36 (include):
> >   include could not find load file:
> >
> >     gmxCustomCommandUtilities
> >
> >
> > CMake Error at CMakeLists.txt:37 (include):
> >   include could not find load file:
> >
> >     gmxOptionUtilities
> >
> >
> > CMake Error at CMakeLists.txt:53 (gmx_dependent_option):
> >   Unknown CMake command "gmx_dependent_option".
> >
> > """
> >
> > What should I do?
> >
> >
> > Thanks for your attention,
> >
> > Michele
> >
> >
> > p.s. I am referring to the github master branch current version
> > --
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