[gmx-users] (no subject)

[Dallas Warren]

Download and use the forcefield files from the ATB server website, and then
make that you correctly point to it in your top file.

On Sat, 14 Mar. 2020, 7:32 pm FAISAL NABI, <fnabi at myamu.ac.in> wrote:

> Hi,
> I have been a new user and i was following the protein-ligand complex
> tutorial for MD. I have used GROMOS96 54a7 FF and to build ligand topology
> i have used ATB webserver. I did download the .itp and .pdb file from there
> and converted that to .gro file. The problem i am facing is it shows an
> error while i add ions that "Atomtype CAro not found", although i have
> added the atomtypes in the gromacs topology file still it's showing the
> same error. I request if somebody could provie me a stepwise protocol i
> could follow.
>
> Thank you
>
> --
>
> Faisal Nabi
>
> *Pre-Doctoral Fellow (CSIR-JRF)*
> C/o Professor Rizwan Hassan Khan
> Interdisciplinary Biotechnology Unit,
> Aligarh Muslim University, Aligarh, UP, INDIA.
> Email-            *fnabi at myamy.ac.in <fnabi at myamy.ac.in>*
> *                      faisalbiochem at gmail.com <faisalbiochem at gmail.com>*
> Contact no. - *+91-8923713214*
> --
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