[gmx-users] lipid tail order parameter

[Piggot T.]

Hi,

The modified version of g_order provided as part of the SI in:

https://pubs.acs.org/doi/abs/10.1021/acs.jctc.7b00643#

should be able to calculate the order parameters radially from your protein.

Cheers

Tom

On 18 Mar 2020, at 11:02, Ipsita Basu <ibasu788 at gmail.com> wrote:

Dear all,
I want to calculate lipid tail order parameter as a function of
lateral distance from protein for ex the x axis will be the distance
of the lipids from the protein in xy plane and y axis will be those
sn1/sn2 tail order parameter (time averaged and averaged over the
atoms). Is there any other methods rather than combination of g_select
and g_order commands.
Thanks in advance...

Ipsita Basu
Post Doctoral Fellow,
--
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