[gmx-users] disulfide bridges

Miro Astore miro.astore at gmail.com
Sat May 2 12:55:22 CEST 2020

Hi all,

I'm trying to make a protein with a fair few disulfide bridges and I
couldn't get it to work. I chose -ss yes and increased the minimum distance
in specbonds.dat but it doesn't seem to want to let me see all possible

Any way I can nudge it in the right direction without performing a
minimisation with restraints?

Best, Miro

Miro A. Astore   (he/him)
PhD Candidate | Computational Biophysics
Office 434 A28 School of Physics
University of Sydney

More information about the gromacs.org_gmx-users mailing list