May 2020 Archives by thread

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Starting: Fri May 1 02:00:32 CEST 2020
Ending: Fri May 8 09:15:28 CEST 2020
Messages: 93

• [gmx-users] PBC after energy minimization   Mohamed Abdelaal
  • [gmx-users] PBC after energy minimization   John Whittaker
    • [gmx-users] PBC after energy minimization   Justin Lemkul
• [gmx-users] conformation tensor   Alex
  • [gmx-users] conformation tensor   Dallas Warren
• [gmx-users] dssp 3.1.4   Iman Katouzian
  • [gmx-users] dssp 3.1.4   Mark Abraham
• [gmx-users] Warning: Short Bond pdb2gmx   Sadaf Rani
  • [gmx-users] Warning: Short Bond pdb2gmx   Justin Lemkul
• [gmx-users] disulfide bridges   Miro Astore
  • [gmx-users] disulfide bridges   Justin Lemkul
    • [gmx-users] disulfide bridges   Miro Astore
• [gmx-users] about how to create angle.index with specific angles   Justin Lemkul
  • [gmx-users] about how to create angle.index with specific angles   lazaro monteserin
    • [gmx-users] about how to create angle.index with specific angles   Justin Lemkul
• [gmx-users] Warning: Short Bond pdb2gmx (Justin Lemkul)   Sadaf Rani
  • [gmx-users] Warning: Short Bond pdb2gmx (Justin Lemkul)   Justin Lemkul
• [gmx-users] Redmine posting forbidden?   Eugene Radchenko
  • [gmx-users] Redmine posting forbidden?   Justin Lemkul
• [gmx-users] Failed make check   Gregory Man Kai Poon
• [gmx-users] Lazaro Andres Monteserin Castanedo shared "dPCA" with you   Lazaro Andres Monteserin Castanedo (via Dropbox)
• [gmx-users] dPCA - Compartido desde Dropbox   lazaro monteserin
• [gmx-users] Lincs warning in free energy calculation (FAISAL NABI)   Sadaf Rani
• [gmx-users] Warning: Short Bond pdb2gmx (Justin Lemkul) (Sadaf Rani)   Sadaf Rani
• [gmx-users] apply pH effect on aminoacids   azadeh kordzadeh
  • [gmx-users] apply pH effect on aminoacids   Dallas Warren
• [gmx-users] Glycosylation of ASN   Naba
  • [gmx-users] Glycosylation of ASN   Subhomoi Borkotoky
  • [gmx-users] Glycosylation of ASN   Naba
• [gmx-users] question about how to analyze the free energy landscape generated with gmx sham   lazaro monteserin
• [gmx-users] Lincs warning and Bond length not finite   Mohamed Abdelaal
  • [gmx-users] [EXTERNAL] Lincs warning and Bond length not finite   Smith, Micholas D.
  • [gmx-users] Lincs warning and Bond length not finite   Alex
    • [gmx-users] [EXTERNAL] Re: Lincs warning and Bond length not finite   Smith, Micholas D.
    • [gmx-users] Lincs warning and Bond length not finite   Mohamed Abdelaal
• [gmx-users] How to recover the corrupted .xtc file?   Myunggi Yi
• [gmx-users] Plumed tutorial   Dinesh Kumar
  • [gmx-users] Plumed tutorial   Mala L Radhakrishnan
• [gmx-users] Need help creating md.mdp for silica(quartz)?   Ekatherina O
  • [gmx-users] Need help creating md.mdp for silica(quartz)?   Dallas Warren
• [gmx-users] Free energy calculation and Lincs warning   Sadaf Rani
• [gmx-users] GROMACS mailing-list will move to a forum   Paul bauer
  • [gmx-users] GROMACS mailing-list will move to a forum   Paul bauer
• [gmx-users] Question about Mean Square Displacement (MSD)   Sina Omrani
• [gmx-users] Set up anti parallel membrane system for CompEL simulation   Zheng Ruan
  • [gmx-users] Set up anti parallel membrane system for CompEL simulation   Jochen Hub
    • [gmx-users] Set up anti parallel membrane system for CompEL simulation   Jochen Hub
      • [gmx-users] Set up anti parallel membrane system for CompEL simulation   Zheng Ruan
• [gmx-users] apply protonation state CYS amino acid   azadeh kordzadeh
  • [gmx-users] apply protonation state CYS amino acid   Justin Lemkul
• [gmx-users] Size of Water Pools   Shan Jayasinghe
• [gmx-users] [gmx users] Terminal amide hydrogens not included in H-bond analysis   Neena Susan Eappen
  • [gmx-users] [gmx users] Terminal amide hydrogens not included in H-bond analysis   Justin Lemkul
• [gmx-users] How to apply position restrain on selected atoms in .gro files in Gromacs?   Debashish Banerjee
  • [gmx-users] How to apply position restrain on selected atoms in .gro files in Gromacs?   Debashish Banerjee
  • [gmx-users] How to apply position restrain on selected atoms in .gro files in Gromacs?   Justin Lemkul
    • [gmx-users] How to apply position restrain on selected atoms in .gro files in Gromacs?   Debashish Banerjee
      • [gmx-users] How to apply position restrain on selected atoms in .gro files in Gromacs?   Debashish Banerjee
• [gmx-users] Free volume variation during the simulation   Mohamed Abdelaal
  • [gmx-users] Free volume variation during the simulation   Arun Srikanth
    • [gmx-users] Free volume variation during the simulation   Mohamed Abdelaal
  • [gmx-users] Free volume variation during the simulation   David van der Spoel
    • [gmx-users] Free volume variation during the simulation   Mohamed Abdelaal
      • [gmx-users] Free volume variation during the simulation   Arun Srikanth
      • [gmx-users] Free volume variation during the simulation   Mohamed Abdelaal
      • [gmx-users] Free volume variation during the simulation   David van der Spoel
      • [gmx-users] Free volume variation during the simulation   Mohamed Abdelaal
• [gmx-users] Info regarding restrained minimization, equilibration & production   Paolo Costa
  • [gmx-users] Info regarding restrained minimization, equilibration & production   Justin Lemkul
    • [gmx-users] Info regarding restrained minimization, equilibration & production   Paolo Costa
      • [gmx-users] Info regarding restrained minimization, equilibration & production   Justin Lemkul
      • [gmx-users] Info regarding restrained minimization, equilibration & production   Paolo Costa
      • [gmx-users] Info regarding restrained minimization, equilibration & production   Justin Lemkul
      • [gmx-users] Info regarding restrained minimization, equilibration & production   Paolo Costa
      • [gmx-users] Info regarding restrained minimization, equilibration & production   Justin Lemkul
      • [gmx-users] Info regarding restrained minimization, equilibration & production   Paolo Costa
• [gmx-users] Question on energygrps setting   Lei Qian
  • [gmx-users] Question on energygrps setting   Justin Lemkul
    • [gmx-users] Question on energygrps setting   Devargya Chakraborty
      • [gmx-users] Question on energygrps setting   Justin Lemkul
      • [gmx-users] Question on energygrps setting   Devargya Chakraborty
      • [gmx-users] Question on energygrps setting   Justin Lemkul
• [gmx-users] Need help creating md.mdp for silica(quartz)?   Ekatherina O
  • [gmx-users] Need help creating md.mdp for silica(quartz)?   Debashish Banerjee
    • [gmx-users] Need help creating md.mdp for silica(quartz)?   Debashish Banerjee
  • [gmx-users] Need help creating md.mdp for silica(quartz)?   Justin Lemkul
• [gmx-users] gmx distance com error   Debashish Banerjee
  • [gmx-users] gmx distance com error   Debashish Banerjee
• [gmx-users] Negative part of the reaction coordinate in PMF   Alex
• [gmx-users] Question about parameters for simulation annealing   lazaro monteserin
• [gmx-users] Lazaro Andres Monteserin Castanedo shared "gibbs-1_2.xpm" with you   Lazaro Andres Monteserin Castanedo (via Dropbox)
• [gmx-users] Need help creating md.mdp for silica(quartz)?   Ekatherina O
• [gmx-users] Need help creating md.mdp for silica(quartz)?   Ekatherina O

Last message date: Fri May 8 09:15:28 CEST 2020
Archived on: Fri May 8 09:15:30 CEST 2020

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