[gmx-developers] FW: Integerating with Eclipse

[Jernej Zidar]

Any particular reason for trying to work on a very obsolete version?

Gromacs 4.5.7 is *very* old and outdated. You'll probably have less
problems with more recent one (anything from the 5.x branch will do).

Cheers from one-north!

Jernej

On Thu, Jul 2, 2015 at 4:54 PM, Amr ALHOSSARY <amr_alhossary at hotmail.com> wrote:
> Hi,
>
> I am trying to import gromacs 4.5.7 into Eclipse Luna with latest CDT,
> following the steps proposed by Roland five years ago
> (https://mailman-1.sys.kth.se/pipermail/gromacs.org_gmx-developers/2010-Janu
> ary/003921.html ).
>
> Egit works well to import the files.
> Then I call cmake in the project root, making the build directory in the
> same src directory, using this command line:
>
> cmake -G"Eclipse CDT4 - Unix Makefiles" -DCMAKE_BUILD_TYPE=Debug
> -DGMX_BUILD_OWN_FFTW=ON --build src/   ./
>
> and import the project using the “existing code as Makefile project” wizard.
> The import works well. It compiles, runs, and debugs. However, it seems that
> the indexer can not parse the files well.
> Although the includes are available and navigable, The indexer cannot parse
> a lot of type definitions and macros For example: in md.c,  gmx_large_int_t
> couldn’t be resolved, although I can navigate to “typedefs.h” and from it to
> “types/simple.h”. Similar situation for the macro “MASTER(cr)”.
>
> Please advise how can I fix this out.
>
> Thanks for help
>
> Amr
>
>
>
>
>
> Best Regards,
> Amr AL-HOSSARY
>
>
> Amr Ali AL-HOSSARY |   Ph.D. Candidate | International PhD program in
> Computational Biology and Bioinformatics | School of Computer
> Engineering |   Nanyang Technological University | Singapore (GMT+8)
> |  Email:  aalhossary at pmail.ntu.edu.sg |  Mobile: +65-94572816
>
>
>
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