[gmx-users] do_dssp

Alan Wilter Sousa da Silva alan at biof.ufrj.br
Wed Feb 20 21:55:13 CET 2002


Thank you Erik,

However we already have dssp working well and with the
environmental variable set properly. What we need is:

'do_dssp'

The one which came with GMX 3.0 seems to be with some bug.
Would it be possible to get a debugged binary version of 'do_dssp'?

Many thanks in advance,

On Wed, 20 Feb 2002, Erik Lindahl wrote:

> paloureiro at biof.ufrj.br wrote:
>
> > Dear GROMACS users,
> >
> > sorry if I have missed something, but:
> > 1)is there any new version of do_dssp?
> > 2)if so, how can I get it?
> >
>
> Hi,
>
> You can download a linux version from
>
> http://www.cmbi.kun.nl/swift/dssp/
>
> Although you'll have to rename the binary to 'dssp'. It works perfect
> with 3.1 beta, and from what I've heard it's also working with 3.0 if
> you set the environment variable properly - check earlier list postings!
>
> Cheers,
>
> Erik
>
>
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-- 
-----------------------
Alan Wilter S. da Silva
-----------------------
 Laboratório de Física Biológica
  Instituto de Biofísica Carlos Chagas Filho
   Universidade do Brasil/UFRJ
    Rio de Janeiro, Brasil





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