[gmx-users] small molecule topologies with PRODRG

Alexandre Suman de Araujo asaraujo at if.sc.usp.br
Wed Sep 25 18:19:47 CEST 2002


Congratulations Daan!!!!!!
And thank you very much.

[]'s
Alexandre Suman de Araujo
IFSC - USP - São Carlos
UIN: 6194055
----- Original Message -----
From: "Daan Virtual" <vdava at davapc1.bioch.dundee.ac.uk>
To: <gmx-users at gromacs.org>
Sent: Wednesday, September 25, 2002 10:34 AM
Subject: [gmx-users] small molecule topologies with PRODRG


>
> Dear GMX-ers
>
> Because several similar questions concerning the small molecule topology
> generator PRODRG are being asked repeatedly I have finally taken the time
> to write a FAQ. This is linked from the PRODRG home page
> http://davapc1.bioch.dundee.ac.uk/programs/prodrg
>
> Hope this helps.
>
> cheers
>
> Daan
>
>
############################################################################
##
>
> Dr. Daan van Aalten                    Wellcome Trust CDA Fellow
> Wellcome Trust Biocentre, Dow Street   TEL: ++ 44 1382 344979
> Div. of Biol.Chem. & Mol.Microbiology  FAX: ++ 44 1382 345764
> School of Life Sciences                E-mail:
dava at davapc1.bioch.dundee.ac.uk
> Univ. of Dundee, Dundee DD1 5EH, UK    WWW:
http://davapc1.bioch.dundee.ac.uk
>
>         O     C           O     C         Visit the PRODRG server to take
>         "     |           "     |         the stress out of your
topologies!
>   N--c--C--N--C--C--N--C--C--N--C--C--O
>      |           "     |           "
http://davapc1.bioch.dundee.ac.uk/
>      C-C-O       O   C-C-C         O
programs/prodrg/prodrg.html
>        "
>        O
>
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