[gmx-users] How to make a two-dimension box?
David van der Spoel
spoel at xray.bmc.uu.se
Thu Apr 3 09:22:00 CEST 2003
On Thu, 2003-04-03 at 09:11, Li Daobing wrote:
> Hello gromacs-users:
> I want to do NVT on a membrane model with water in two side.
> I find that after the NVT the membrane drift along z axis about
> half of the box size, I don't want the membrane to drift, I want
> to make a two-dimension box, how can i do this?
You can stop the center of mass motion per group. This is recommended
for membrane systems.
> Li Daobing
> gmx-users mailing list
> gmx-users at gromacs.org
> Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
Dr. David van der Spoel, Dept. of Cell & Mol. Biology
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://xray.bmc.uu.se/~spoel
More information about the gromacs.org_gmx-users