[gmx-users] Demo

David spoel at xray.bmc.uu.se
Fri May 2 21:24:01 CEST 2003


On Fri, 2003-05-02 at 18:09, Nagy, Peter I. wrote:
> To Whom It May Concern:
> 
>       Recently we have downloaded the GROMACS binary software to an
> SGI Indigo2 workstation working at the Dept. Medicinal and Biological
> Chemistry, The University of Toledo, Toledo, Ohio, 43606, USA. The
> machine works under the operation system Unix 6.5.8 at this moment (to
> be updated soon) with 192 MB memory and 9 GB disc-space, with about
> half of them empty.
>       The download has been done seemingly succesfully. We have
> changed the
> PATH and started the demo. The pdb2gmx command was completed, the
> screen showed:
>   
>   First line:    Read 108 atoms
>      .
>      .
>   Last line:  Now there are 13 residues with 143 atoms
> 
> and a message was obtained: pdb2gmx finished
>  
> Then we were promted:Press <enter> After having done it, the message
> was:
> 
>   The output of the genbox program should appear
>   Unmatched "
> 
> Please, help us to fix the problem and letting us to continue the
> demo.
There may be a problem with exclamation marks in some of the text
comments in the demo file, that are misinterpreted on the SGI. You can
take them out with an editor. Make sure you preserver the one on the
first line though.


> 
>                                          Sincerely yours
> 
>                                          Peter I. Nagy
>                                          reserch Professor
>                                     e-mail: pnagy at utnet.utoledo.edu
>                                     fax: 1-419-530-7946
-- 
Groeten, David.
________________________________________________________________________
Dr. David van der Spoel, 	Dept. of Cell and Molecular Biology
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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