[gmx-users] freezing atoms does not speed up calculation
Sung-Joo Lee
sungjoo at stanford.edu
Wed Jul 14 00:37:17 CEST 2004
Hi,
I've been running gromacs with freeze_grps setting in the
mdp.
I was hoping if I freezed atoms, that would speed up things a lot, since
you don't need to calculate the force between the frozen atoms.
Appearantly not.
It has almost no effect on the speed.
I've verified that my setting is correct, and it indeed freezes the
atoms I chose in the mdp file.
Does anybody have experience otherwise?
Thanks,
Sungjoo
More information about the gromacs.org_gmx-users
mailing list